Neuroscience

The list contains regular articles, books & book chapters and conference proceedings, all peer reviewed.

V. Lemaire, D. Battaglia, I. Guyon, J. Soriano (Editors). "Neural Connectomics Challenge", Spriinger (2017).

J. Soriano and J. Casademunt. "Neuronal Cultures: Brain's complexity and Non-equilibrium Physics in a Dish". Contributions to Science 11, 225-235 (2016). OPEN ACCESS.
S. Teller and J. Soriano, "Experiments in clustered neuronal networks: A paradigm for complex modular dynamics", AIP Conf. Proc. (International Conference of Numerical Analysis and Applied Mathematics 2015), 1738, article 210015 (2016).

R. Fernández-Santiago, et al., “Aberrant epigenome in iPSC-derived dopaminergic neurons from Parkinson's disease patients”, EMBO Molecular Medicine 7, 1529-46 (2015). OPEN ACCESS.
S. Teller, I.B. Tahirbegi, M. Mir, J. Samitier, J. Soriano, “Magnetite-Amyloid-beta deteriorates activity and functional organization in an in vitro model for Alzheimer's disease”, Sci Rep 5, 17261 (2015). OPEN ACCESS.
I. Canals, J. Soriano, J.G. Orlandi, R. Torrent, Y. Richaud-Patin, S. Jiménez-Delgado, S. Merlin, A. Follenzi, A. Consiglio, L. Vilageliu. D. Grinberg, Á. Raya, “Activity and high-order effective connectivity alterations in Sanfilippo C patient-specific neuronal networks”, Stem Cell Reports 5, 1-12 (2015).
N. Fernàndez-Castillo, et al., “Transcriptomic and genetic studies identify NFAT5 as a candidate gene for cocaine dependence”, Translational Psychiatry 5, e667 (2015). OPEN ACCESS.
J. Soriano and I. Sendiña-Nadal. “Cultivos neuronales: sistema modelo para comprender la dinámica y la connectividad en redes ”, in 'Conectividad funcional y anatómica en el cerebro humano', capítulo 10, pp. 103-113, Elsevier (2015).
J.G. Orlandi, B. Ray, D. Battaglia, I. Guyon, V. Lemaire, M. Saeed, A. Statnikov, O. Stetter, J. Soriano, "First Connectomics Challenge: From Imaging to Connectivity", JMLR 46, 1-22 (2015). ACCESS

S. Teller, C. Granell, M. DeDomenico, J. Soriano, S. Gómez, A. Arenas, “Emergence of assortative mixing between clusters of cultured neurons”, PLoS Comput. Biol. 10, e1003796 (2014).
O. Stetter, J.G. Orlandi, J. Soriano, D. Battaglia, T. Geisel, “Transfer Entropy Reconstruction and Labeling of Neuronal Connections from Simulated Calcium Imaging”, PLoS One 9, e98842 (2014).
C. Schmeltzer, J. Soriano, I.M. Sokolov, S. Rüdiger, “Percolation of spatially constrained Erdös-Rényi networks with degree correlations”. Phys. Rev. E 89, 012116 (2014).
S. Teller, J. Soriano, "Dynamics in clustered neuronal cultures: a versatile experimental system for complex networks", Conference Proceedings (NDCN Workshop, Russia 2014).
I. Guyon, D. Battaglia, A. Guyon, V. Lemaire, J.G. Orlandi, M. Saeed, J. Soriano, A. Statnikov, O. Stetter, B. Ray, Design of the First Neuronal Connectomics Challenge: From Imaging to Connectivity", Conference Proceedings (IEEE WCCI Congress, China 2014).

E. Tibau, M. Valencia, J. Soriano, “Identification of Neuronal Network Properties from the Spectral Analysis of Calcium Imaging Signals in Neuronal Cultures”, Front. Neur. Circ. 7, article 199 (2013).
J.G. Orlandi, J. Soriano, E. Álvarez-Lacalle, S. Teller, J. Casademunt, “Noise focusing and the emergence of coherent activity in neuronal cultures”. Nat. Physics 9, 582-590 (2013).
J. Orlandi, E. Álvarez-Lacalle, J. Soriano, J. Casademunt, "The emergence of spontaneous activity in neuronal cultures", AIP Conf. Proc. (12th Granada Seminar) 1510, 25 (2013).
S. Teller, J. Soriano, "Experiments on Clustered Neuronal Networks", AIP Conf. Proc. (12th Granada Seminar) 1510, 244 (2013).
E. Tibau, C. Bendiksen, S. Teller, N. Amigó, J. Soriano, "Activity-connectivity: Dynamics in Patterned Neuronal Cultures", AIP Conf. Proc. (12th Granada Seminar) 1510, 54 (2013).
O. Stetter, J. Soriano, T. Geisel, D. Battaglia, "From structure to function, via dynamics", AIP Conf. Proc. (12th Granada Seminar) 1510, 64 (2013).

O. Stetter, D. Battaglia, J. Soriano, T. Geisel, “Model-Free Reconstruction of Excitatory Neuronal Connectivity from Calcium Imaging Signals”. PLoS Comput. Biol. 8, e1002653 (2012).
D. Battaglia, J. Soriano, O. Stetter, "Function follows dynamics, not (only) structure: from neural cultures to flexible information routing in the brain", Nonlinear Theory and Its Applications, IEICE Conference Proceedings 1, 551 (2012).
J.G. Orlandi, E. Álvarez-Lacalle, S. Teller, J. Casademunt, J. Soriano, "The role of connectivity and noise in the emergence of spontaneous activity in cultured neuronal networks", Nonlinear Theory and Its Applications, IEICE Conference Proceedings 1, 547(2012).

O. Cohen, A. Keselman, E. Moses, M. Rodríguez-Martínez, J. Soriano, T Tlusty, "Quorum Percolation: More is Different in Living Neural Networks", Europhys. Lett., 89, 18008 (2010).
S. Jacobi, J. Soriano, E. Moses. "BDNF and NT-3 increase velocity of activity front propagation in uni-dimensional hippocampal cultures", J. Neurophysiol. 104, 2932 (2010).
S. Jacobi, J. Soriano, M. Segal, E. Moses, "BDNF and NT-3 increase excitatory input connectivity in rat hippocampal cultures", Eur. J Neurosci. 30, 998 (2009).
J. Soriano, M. Rodríguez-Martínez, T. Tlusty, E. Moses. “Development of Input Connections in Neural Cultures”, PNAS 105, 13758-13763 (2008).
J. Soriano, I. Breskin, E. Moses, T. Tlusty, "Percolation approach to study connectivity in living neural networks", AIP Conf. Proc. (6th Granada Seminar) 887, 96 (2007).
J.-P. Eckman, O. Feinerman, L. Gruendlinger, E. Moses, J. Soriano, T. Tlusty, “The Physics of Living Neural Networks”, Phys. Rep. 449, 54-76 (2007).
I. Breskin, J. Soriano, E. Moses, T. Tlusty. “Percolation in Living Neural Networks”, Phys. Rev. Lett. 97, 188102 (2006).

DISSEMINATION OF SCIENCE

J. Casademunt, J.G. Orlandi, J. Soriano, "Dinámica colectiva de las redes neuronales", Mente y Cerebro, Julio 2014. Link. PDF.
J. Soriano,"The problem of neuronal connectivity: how physicists can contribute to neuroscience", EL PAÍS, 2012. Link.
J. Soriano, "Das Gehirn als physikalische Größe", [The Brain for Physicists], FRANKFURTER ALLGEMEINE, 2011. Link.